---

type: liftover_chain

filename: hg19-chm13v2.over.chain.gz

chrom_prefix:
  variant_coordinates:
    add_prefix: "chr"


meta: 

  summary: |
     Liftover Chain Hg19 to T2T



  description: |
    Liftover Chain Hg19 to T2T

    Downloaded on 10/03/2025

    [https://hgdownload.soe.ucsc.edu/hubs/GCA/009/914/755/GCA\_009914755.4/liftOver/hg19-chm13v2.over.chain.gz](https://hgdownload.soe.ucsc.edu/hubs/GCA/009/914/755/GCA_009914755.4/liftOver/hg19-chm13v2.over.chain.gz)


  labels:
    source_genome: hg19/genomes/GATK_ResourceBundle_5777_b37_phiX174 
    target_genome: t2t/genomes/t2t-chm13v2.0

