Resource
| Id | hg38/scores/phastCons20way |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary |
Conservation score based on the multiple alignment of 20 species
|
| Description |
PhastCons score is a measure used to assess the level of evolutionary conservation of genomic sequences. This score is derived from a method called PHAST (Phylogenetic Analysis with Space/Time models), which uses multiple sequence alignments and phylogenetic trees to identify conserved elements across different species. phastCons20way refers to a specific set of PhastCons conservation scores derived from a multiple sequence alignment of the genomes of 20 different species. PhastCons scores typically range from 0 to 1. A score closer to 1 suggests high conservation, implying that the sequence has remained largely unchanged through evolution, likely due to selective pressure to maintain its function. A score closer to 0 indicates low conservation, suggesting that the sequence is less critical or more variable across species. Downloaded on: 06/04/24 https://hgdownload.soe.ucsc.edu/goldenPath/hg38/phastCons20way/hg38.phastCons20way.bw |
| Labels |
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| phastCons20way | float |
phastCons20way |
The score is a number that reflects the conservation at a position.
Small values desc: less conserved
Large values desc: more conserved
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[0, 1] |
Files
| Filename | Size | md5 |
|---|---|---|
| genomic_resource.yaml | 1.95 KB | 0b1c1ee20e2776dbe48afa432d40d2a2 |
| hg38.phastCons20way.bw | 6.63 GB | f6a6eed2e3a06bd1e45b5c8cfcc38379 |
| hg38.phastCons20way.bw.dvc | 108.0 B | a15d464f72f9a5de86f48df5c18ba89b |
| statistics/ |