Resource

Id hg38/gene_models/knownGene_v20230628
Type gene_models
Version 0
Summary
Description
Labels
  • reference_genome: hg38/genomes/GRCh38-hg38

Configuration

Gene models file: hg38.knownGene.txt.gz

Format: default

Statistics

Chromosome statistics

Transcript number Protein coding transcript number Gene number Protein coding gene number
Global 274,031 121,528 236,657 84,154
chr1 22,477 9,875 19,572 6,970
chr10 9,151 3,995 8,012 2,856
chr10_GL383545v1_alt 8 2 8 2
chr10_GL383546v1_alt 22 8 19 5
chr10_KI270824v1_alt 5 0 5 0
chr10_KI270825v1_alt 19 4 19 4
chr10_KN196480v1_fix 46 32 38 24
chr10_KQ090021v1_fix 12 4 11 3
chr10_ML143354v1_fix 17 2 17 2
chr10_ML143355v1_fix 17 6 16 5
chr11 14,817 7,320 12,802 5,305
chr11_JH159136v1_alt 17 11 17 11
chr11_JH159137v1_alt 14 4 14 4
chr11_KI270721v1_random 4 1 4 1
chr11_KI270829v1_alt 13 6 13 6
chr11_KI270830v1_alt 19 9 18 8
chr11_KI270831v1_alt 72 34 63 25
chr11_KI270832v1_alt 110 61 92 43
chr11_KI270902v1_alt 27 11 27 11
chr11_KI270903v1_alt 23 11 22 10
chr11_KI270927v1_alt 32 14 32 14
chr11_KN196481v1_fix 75 36 71 32
chr11_KN538368v1_alt 15 12 10 7
chr11_KQ759759v1_fix 9 7 9 7
chr11_KV766195v1_fix 3 1 3 1
chr11_KZ559109v1_fix 56 26 54 24
chr11_KZ559110v1_alt 28 16 25 13
chr11_KZ559111v1_alt 13 8 13 8
chr11_ML143357v1_fix 4 0 4 0
chr11_ML143358v1_fix 88 45 72 29
chr11_ML143359v1_fix 28 9 26 7
chr11_ML143360v1_fix 60 36 51 27
chr12 13,744 6,467 12,084 4,807
chr12_GL383550v2_alt 12 2 12 2
chr12_GL383551v1_alt 3 0 3 0
chr12_GL383552v1_alt 3 0 3 0
chr12_GL383553v2_alt 6 4 4 2
chr12_GL877875v1_alt 14 3 14 3
chr12_GL877876v1_alt 51 19 49 17
chr12_KI270833v1_alt 11 7 10 6
chr12_KI270834v1_alt 16 11 14 9
chr12_KI270835v1_alt 18 8 15 5
chr12_KI270837v1_alt 5 5 5 5
chr12_KI270904v1_alt 60 34 57 31
chr12_KN538369v1_fix 46 25 39 18
chr12_KN538370v1_fix 8 2 7 1
chr12_KQ759760v1_fix 1 0 1 0
chr12_KZ208916v1_fix 107 50 85 28
chr12_KZ208917v1_fix 1 0 1 0
chr12_KZ559112v1_alt 2 0 2 0
chr12_ML143361v1_fix 38 9 37 8
chr12_ML143362v1_fix 81 47 77 43
chr13 4,678 1,525 4,250 1,097
chr13_KI270838v1_alt 10 6 10 6
chr13_KI270840v1_alt 9 0 9 0
chr13_KI270842v1_alt 6 3 5 2
chr13_KN538371v1_fix 5 2 5 2
chr13_KN538372v1_fix 12 2 12 2
chr13_KN538373v1_fix 3 0 3 0
chr13_ML143365v1_fix 4 1 4 1
chr13_ML143366v1_fix 5 4 5 4
chr14 9,237 4,244 8,186 3,193
chr14_GL000009v2_random 1 1 1 1
chr14_GL000194v1_random 2 2 2 2
chr14_GL000225v1_random 1 0 1 0
chr14_KI270726v1_random 2 2 2 2
chr14_KI270844v1_alt 22 11 19 8
chr14_KI270845v1_alt 10 9 8 7
chr14_KI270846v1_alt 197 95 197 95
chr14_KI270847v1_alt 162 109 130 77
chr14_KZ208919v1_alt 5 1 5 1
chr14_KZ208920v1_fix 475 270 409 204
chr14_ML143367v1_fix 5 4 5 4
chr15 9,118 3,697 8,192 2,771
chr15_GL383554v1_alt 39 6 38 5
chr15_GL383555v2_alt 15 4 15 4
chr15_KI270727v1_random 8 4 8 4
chr15_KI270848v1_alt 32 16 32 16
chr15_KI270849v1_alt 36 14 31 9
chr15_KI270850v1_alt 63 23 59 19
chr15_KI270851v1_alt 16 2 16 2
chr15_KI270852v1_alt 28 7 28 7
chr15_KI270905v1_alt 123 46 117 40
chr15_KI270906v1_alt 16 6 14 4
chr15_KQ031389v1_alt 67 22 59 14
chr15_ML143369v1_fix 27 6 27 6
chr15_ML143370v1_fix 86 43 68 25
chr15_ML143371v1_fix 121 108 105 92
chr15_ML143372v1_fix 4 2 4 2
chr16 11,632 5,403 10,360 4,131
chr16_GL383556v1_alt 19 14 17 12
chr16_GL383557v1_alt 18 12 16 10
chr16_KI270728v1_random 7 5 7 5
chr16_KI270853v1_alt 226 120 207 101
chr16_KI270854v1_alt 36 17 31 12
chr16_KI270855v1_alt 122 82 101 61
chr16_KI270856v1_alt 7 1 7 1
chr16_KQ090026v1_alt 20 6 19 5
chr16_KQ090027v1_alt 9 4 9 4
chr16_KV880768v1_fix 43 39 35 31
chr16_KZ208921v1_alt 10 4 10 4
chr16_KZ559113v1_fix 12 2 12 2
chr16_ML143373v1_fix 33 19 25 11
chr17 14,689 7,307 12,942 5,560
chr17_GL000205v2_random 1 0 1 0
chr17_GL000258v2_alt 132 72 120 60
chr17_GL383563v3_alt 40 18 36 14
chr17_GL383564v2_alt 13 8 13 8
chr17_GL383565v1_alt 1 0 1 0
chr17_GL383566v1_alt 11 4 11 4
chr17_JH159146v1_alt 43 33 40 30
chr17_JH159147v1_alt 9 7 9 7
chr17_JH159148v1_alt 9 6 9 6
chr17_KI270857v1_alt 385 210 326 151
chr17_KI270858v1_alt 3 0 3 0
chr17_KI270859v1_alt 12 9 8 5
chr17_KI270860v1_alt 38 14 36 12
chr17_KI270861v1_alt 84 37 73 26
chr17_KI270862v1_alt 56 27 52 23
chr17_KI270907v1_alt 26 13 21 8
chr17_KI270908v1_alt 171 77 150 56
chr17_KI270909v1_alt 52 30 38 16
chr17_KI270910v1_alt 36 19 33 16
chr17_KV575245v1_fix 63 48 55 40
chr17_KV766196v1_fix 34 14 32 12
chr17_KV766198v1_alt 113 45 104 36
chr17_KZ559114v1_alt 1 0 1 0
chr17_ML143374v1_fix 100 61 81 42
chr17_ML143375v1_fix 21 16 18 13
chr18 4,710 1,831 4,211 1,332
chr18_GL383567v1_alt 13 5 11 3
chr18_GL383569v1_alt 2 0 2 0
chr18_GL383571v1_alt 6 1 6 1
chr18_GL383572v1_alt 10 5 10 5
chr18_KI270863v1_alt 11 4 10 3
chr18_KI270911v1_alt 20 11 14 5
chr18_KI270912v1_alt 2 0 2 0
chr18_KQ090028v1_fix 16 6 15 5
chr18_KQ458385v1_alt 3 2 3 2
chr18_KZ208922v1_fix 2 0 2 0
chr18_KZ559115v1_fix 12 0 12 0
chr18_KZ559116v1_alt 1 0 1 0
chr19 14,424 7,758 12,612 5,946
chr19_GL000209v2_alt 16 13 16 13
chr19_GL383573v1_alt 27 18 23 14
chr19_GL383574v1_alt 14 9 13 8
chr19_GL383575v2_alt 18 8 15 5
chr19_GL383576v1_alt 12 3 12 3
chr19_GL949746v1_alt 215 114 186 85
chr19_GL949747v2_alt 112 82 90 60
chr19_GL949748v2_alt 50 48 38 36
chr19_GL949749v2_alt 47 46 35 34
chr19_GL949750v2_alt 45 44 32 31
chr19_GL949751v2_alt 51 47 39 35
chr19_GL949752v1_alt 256 138 218 100
chr19_GL949753v2_alt 152 94 125 67
chr19_KI270865v1_alt 11 7 8 4
chr19_KI270866v1_alt 18 13 17 12
chr19_KI270867v1_alt 33 9 29 5
chr19_KI270868v1_alt 20 20 17 17
chr19_KI270882v1_alt 27 19 27 19
chr19_KI270883v1_alt 20 12 19 11
chr19_KI270884v1_alt 23 16 23 16
chr19_KI270885v1_alt 22 13 21 12
chr19_KI270886v1_alt 12 9 12 9
chr19_KI270887v1_alt 17 12 17 12
chr19_KI270888v1_alt 12 10 12 10
chr19_KI270889v1_alt 12 9 12 9
chr19_KI270890v1_alt 18 13 18 13
chr19_KI270891v1_alt 16 9 16 9
chr19_KI270914v1_alt 18 13 18 13
chr19_KI270915v1_alt 16 9 16 9
chr19_KI270916v1_alt 18 12 18 12
chr19_KI270917v1_alt 35 28 25 18
chr19_KI270918v1_alt 14 8 14 8
chr19_KI270919v1_alt 18 10 18 10
chr19_KI270920v1_alt 33 26 23 16
chr19_KI270921v1_alt 40 31 29 20
chr19_KI270922v1_alt 32 23 23 14
chr19_KI270923v1_alt 33 25 23 15
chr19_KI270929v1_alt 33 25 22 14
chr19_KI270930v1_alt 21 14 21 14
chr19_KI270931v1_alt 17 10 17 10
chr19_KI270932v1_alt 19 12 19 12
chr19_KI270933v1_alt 23 14 23 14
chr19_KI270938v1_alt 354 229 277 152
chr19_KN196484v1_fix 63 46 51 34
chr19_KQ458386v1_fix 143 80 132 69
chr19_KV575246v1_alt 23 16 21 14
chr19_KV575247v1_alt 26 18 24 16
chr19_KV575248v1_alt 24 16 24 16
chr19_KV575249v1_alt 69 64 29 24
chr19_KV575250v1_alt 49 43 30 24
chr19_KV575251v1_alt 29 23 21 15
chr19_KV575252v1_alt 30 23 22 15
chr19_KV575253v1_alt 24 16 24 16
chr19_KV575254v1_alt 9 4 8 3
chr19_KV575255v1_alt 24 16 24 16
chr19_KV575256v1_alt 59 54 32 27
chr19_KV575257v1_alt 8 3 7 2
chr19_KV575258v1_alt 43 38 21 16
chr19_KV575259v1_alt 32 25 23 16
chr19_KV575260v1_alt 20 14 17 11
chr19_ML143376v1_fix 108 63 101 56
chr1_GL383518v1_alt 36 13 34 11
chr1_GL383519v1_alt 53 19 47 13
chr1_GL383520v2_alt 21 14 17 10
chr1_KI270711v1_random 2 2 2 2
chr1_KI270713v1_random 4 2 4 2
chr1_KI270759v1_alt 3 1 3 1
chr1_KI270760v1_alt 3 0 3 0
chr1_KI270761v1_alt 7 7 7 7
chr1_KI270762v1_alt 75 31 69 25
chr1_KI270763v1_alt 23 11 19 7
chr1_KI270765v1_alt 12 1 12 1
chr1_KI270766v1_alt 19 10 18 9
chr1_KI270892v1_alt 9 7 9 7
chr1_KN196472v1_fix 10 4 9 3
chr1_KN196473v1_fix 28 12 25 9
chr1_KN196474v1_fix 9 5 8 4
chr1_KN538360v1_fix 22 10 17 5
chr1_KN538361v1_fix 19 7 18 6
chr1_KQ031383v1_fix 38 25 33 20
chr1_KQ458383v1_alt 57 24 49 16
chr1_KQ458384v1_alt 18 3 17 2
chr1_KQ983255v1_alt 22 13 19 10
chr1_KV880763v1_alt 16 5 15 4
chr1_KZ208904v1_alt 12 7 9 4
chr1_KZ208906v1_fix 21 5 21 5
chr2 18,869 7,584 16,872 5,587
chr20 6,063 2,587 5,291 1,815
chr20_GL383577v2_alt 4 0 4 0
chr20_KI270869v1_alt 9 6 7 4
chr20_KI270870v1_alt 24 18 17 11
chr20_KI270871v1_alt 21 13 18 10
chr21 3,283 1,050 2,918 685
chr21_GL383579v2_alt 5 0 5 0
chr21_GL383580v2_alt 17 6 14 3
chr21_GL383581v2_alt 30 19 24 13
chr21_KI270872v1_alt 23 11 17 5
chr21_KI270873v1_alt 12 3 12 3
chr21_ML143377v1_fix 21 4 21 4
chr22 5,353 2,386 4,758 1,791
chr22_GL383582v2_alt 20 10 20 10
chr22_GL383583v2_alt 7 2 6 1
chr22_KB663609v1_alt 26 8 25 7
chr22_KI270731v1_random 2 1 2 1
chr22_KI270733v1_random 4 0 4 0
chr22_KI270734v1_random 5 4 5 4
chr22_KI270875v1_alt 38 22 33 17
chr22_KI270876v1_alt 17 13 13 9
chr22_KI270877v1_alt 14 9 12 7
chr22_KI270878v1_alt 18 0 18 0
chr22_KI270879v1_alt 119 56 113 50
chr22_KI270928v1_alt 41 15 41 15
chr22_KN196485v1_alt 10 5 9 4
chr22_KN196486v1_alt 9 4 9 4
chr22_KQ458387v1_alt 6 2 6 2
chr22_KQ458388v1_alt 19 9 19 9
chr22_KQ759761v1_alt 11 6 10 5
chr22_KQ759762v1_fix 11 4 10 3
chr22_ML143378v1_fix 8 2 8 2
chr22_ML143380v1_fix 3 2 3 2
chr2_GL383521v1_alt 5 3 5 3
chr2_GL383522v1_alt 24 16 17 9
chr2_GL582966v2_alt 5 1 5 1
chr2_KI270767v1_alt 6 0 6 0
chr2_KI270768v1_alt 7 0 7 0
chr2_KI270769v1_alt 10 4 10 4
chr2_KI270770v1_alt 5 0 5 0
chr2_KI270772v1_alt 4 0 4 0
chr2_KI270773v1_alt 1 1 1 1
chr2_KI270774v1_alt 5 2 4 1
chr2_KI270776v1_alt 36 20 32 16
chr2_KI270893v1_alt 6 0 6 0
chr2_KI270894v1_alt 7 3 7 3
chr2_KN538362v1_fix 4 0 4 0
chr2_KN538363v1_fix 53 19 49 15
chr2_KQ031384v1_fix 43 23 43 23
chr2_KQ983256v1_alt 66 40 53 27
chr2_KZ208908v1_alt 8 2 8 2
chr2_ML143341v1_fix 3 2 2 1
chr3 15,975 6,996 13,971 4,992
chr3_GL383526v1_alt 5 2 5 2
chr3_JH636055v2_alt 16 8 12 4
chr3_KI270777v1_alt 17 9 12 4
chr3_KI270779v1_alt 174 23 170 19
chr3_KI270781v1_alt 3 0 3 0
chr3_KI270782v1_alt 19 8 18 7
chr3_KI270783v1_alt 1 0 1 0
chr3_KI270784v1_alt 18 0 18 0
chr3_KI270895v1_alt 171 22 166 17
chr3_KI270924v1_alt 172 24 168 20
chr3_KI270934v1_alt 177 24 174 21
chr3_KI270935v1_alt 154 5 153 4
chr3_KI270936v1_alt 172 24 168 20
chr3_KI270937v1_alt 169 21 166 18
chr3_KN196475v1_fix 62 40 51 29
chr3_KN196476v1_fix 2 0 2 0
chr3_KN538364v1_fix 6 2 6 2
chr3_KQ031385v1_fix 8 5 7 4
chr3_KV766192v1_fix 8 3 7 2
chr3_KZ208909v1_alt 3 0 3 0
chr3_KZ559102v1_alt 3 0 3 0
chr3_KZ559103v1_alt 6 2 6 2
chr3_KZ559105v1_alt 14 11 10 7
chr3_ML143343v1_alt 54 2 53 1
chr4 10,361 4,356 9,142 3,137
chr4_GL000257v2_alt 31 13 29 11
chr4_GL383527v1_alt 10 5 10 5
chr4_GL383528v1_alt 3 0 3 0
chr4_KI270785v1_alt 1 0 1 0
chr4_KI270786v1_alt 7 0 7 0
chr4_KI270788v1_alt 1 0 1 0
chr4_KI270789v1_alt 8 0 8 0
chr4_KI270790v1_alt 6 1 6 1
chr4_KI270896v1_alt 23 7 22 6
chr4_KI270925v1_alt 10 0 10 0
chr4_KQ090014v1_alt 1 0 1 0
chr4_KQ090015v1_alt 29 14 22 7
chr4_KQ983257v1_fix 43 31 20 8
chr4_KQ983258v1_alt 40 29 20 9
chr4_KV766193v1_alt 11 2 10 1
chr4_ML143344v1_fix 2 0 2 0
chr4_ML143345v1_fix 11 4 11 4
chr4_ML143347v1_fix 4 2 4 2
chr4_ML143349v1_fix 7 0 7 0
chr5 11,969 4,766 10,688 3,485
chr5_GL339449v2_alt 176 99 146 69
chr5_GL383531v1_alt 2 0 2 0
chr5_GL383532v1_alt 1 0 1 0
chr5_GL949742v1_alt 8 0 8 0
chr5_KI270791v1_alt 30 6 29 5
chr5_KI270792v1_alt 12 4 11 3
chr5_KI270793v1_alt 5 3 4 2
chr5_KI270794v1_alt 10 7 9 6
chr5_KI270795v1_alt 24 1 24 1
chr5_KI270796v1_alt 3 0 3 0
chr5_KI270897v1_alt 93 54 68 29
chr5_KI270898v1_alt 24 1 24 1
chr5_KV575243v1_alt 17 14 5 2
chr5_KV575244v1_fix 138 69 129 60
chr5_ML143350v1_fix 29 11 27 9
chr6 11,961 5,082 10,478 3,599
chr6_GL000250v2_alt 617 310 522 215
chr6_GL000251v2_alt 1,288 606 1,121 439
chr6_GL000252v2_alt 1,237 563 1,088 414
chr6_GL000253v2_alt 1,057 519 920 382
chr6_GL000254v2_alt 1,205 560 1,076 431
chr6_GL000255v2_alt 1,255 591 1,098 434
chr6_GL000256v2_alt 1,128 519 988 379
chr6_GL383533v1_alt 5 0 5 0
chr6_KB021644v2_alt 1 0 1 0
chr6_KI270758v1_alt 3 3 3 3
chr6_KI270797v1_alt 24 13 21 10
chr6_KI270798v1_alt 14 6 13 5
chr6_KI270799v1_alt 1 0 1 0
chr6_KI270801v1_alt 33 17 28 12
chr6_KI270802v1_alt 4 0 4 0
chr6_KN196478v1_fix 2 0 2 0
chr6_KQ090016v1_fix 16 9 13 6
chr6_KV766194v1_fix 14 5 14 5
chr6_KZ208911v1_fix 35 14 30 9
chr7 12,201 5,117 10,778 3,694
chr7_GL383534v2_alt 34 15 30 11
chr7_KI270803v1_alt 156 103 152 99
chr7_KI270804v1_alt 14 1 14 1
chr7_KI270805v1_alt 4 3 2 1
chr7_KI270806v1_alt 28 15 22 9
chr7_KI270807v1_alt 1 0 1 0
chr7_KI270808v1_alt 9 3 9 3
chr7_KI270809v1_alt 30 17 24 11
chr7_KI270899v1_alt 19 1 19 1
chr7_KQ031388v1_fix 1 0 1 0
chr7_KV880764v1_fix 1 1 1 1
chr7_KV880765v1_fix 45 24 42 21
chr7_KZ208912v1_fix 52 18 49 15
chr7_KZ208913v1_alt 47 46 25 24
chr7_KZ559106v1_alt 6 0 6 0
chr7_ML143352v1_fix 34 3 34 3
chr8 10,300 4,129 9,194 3,023
chr8_KI270810v1_alt 5 0 5 0
chr8_KI270811v1_alt 7 2 6 1
chr8_KI270812v1_alt 6 0 6 0
chr8_KI270813v1_alt 29 17 28 16
chr8_KI270814v1_alt 13 0 13 0
chr8_KI270815v1_alt 11 2 11 2
chr8_KI270816v1_alt 176 103 152 79
chr8_KI270817v1_alt 35 18 25 8
chr8_KI270818v1_alt 8 2 7 1
chr8_KI270819v1_alt 21 7 18 4
chr8_KI270821v1_alt 52 9 49 6
chr8_KI270822v1_alt 45 19 41 15
chr8_KI270900v1_alt 9 3 8 2
chr8_KI270901v1_alt 4 0 4 0
chr8_KI270926v1_alt 20 7 20 7
chr8_KZ208914v1_fix 103 45 94 36
chr8_KZ208915v1_fix 429 139 404 114
chr8_KZ559107v1_alt 5 2 4 1
chr9 8,748 3,706 7,702 2,660
chr9_GL383540v1_alt 6 2 6 2
chr9_GL383541v1_alt 8 1 8 1
chr9_KI270823v1_alt 13 5 12 4
chr9_KN196479v1_fix 90 53 74 37
chrM 37 13 37 13
chrUn_GL000195v1 2 1 2 1
chrUn_GL000213v1 3 2 3 2
chrUn_GL000216v2 1 0 1 0
chrUn_GL000218v1 1 1 1 1
chrUn_GL000219v1 1 1 1 1
chrUn_GL000220v1 4 0 4 0
chrUn_KI270442v1 2 0 2 0
chrUn_KI270744v1 1 0 1 0
chrUn_KI270750v1 1 0 1 0
chrX 8,102 3,951 6,830 2,679
chrX_KI270880v1_alt 16 2 16 2
chrX_KI270881v1_alt 5 4 4 3
chrX_KI270913v1_alt 14 2 14 2
chrX_ML143381v1_fix 14 7 11 4
chrY 1,014 216 935 137
chr11_KQ090022v1_fix 2 0 2 0
chr11_KZ559108v1_fix 6 0 6 0
chr18_GL383570v1_alt 1 0 1 0
chr1_KQ458382v1_alt 1 0 1 0
chr1_KZ208905v1_alt 1 0 1 0
chr21_KI270874v1_alt 2 0 2 0
chr2_KZ208907v1_alt 1 0 1 0
chr2_ML143342v1_fix 1 0 1 0
chr3_KI270780v1_alt 7 0 7 0
chr3_KZ559104v1_fix 2 0 2 0
chr5_KN196477v1_alt 1 0 1 0
chr6_KI270800v1_alt 2 0 2 0
chr6_KQ031387v1_fix 1 0 1 0
chr8_KV880766v1_fix 1 0 1 0
chr9_GL383539v1_alt 1 0 1 0
chr9_GL383542v1_alt 2 0 2 0
chr9_KQ090018v1_alt 1 0 1 0
chrY_KN196487v1_fix 1 0 1 0
chrY_KZ208924v1_fix 6 0 6 0

Files

Filename Size md5
build.sh 81.0 B 451357d8dc3b25e4d9a11f0a8a42325a
genomic_resource.yaml 1.25 KB de3805f981fc8ae9c4de83c99af92cb1
hg38.knownGene.gtf.gz 37.16 MB 861924e0d1497a797788fc641465b9f9
hg38.knownGene.gtf.gz.dvc 105.0 B 86fb9566405e1a16447eedf188ff897a
hg38.knownGene.txt.gz 12.85 MB 446b8c95b5ce6f3413b8a2c7ae817dc2
hg38.knownGene.txt.gz.dvc 105.0 B 76e5abe81b9938808bf343b5c3197b03
statistics/