Resource
| Id | hg38/cnv_collections/DGV |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary |
Database of Genomic Variants (DGV) CNV collection
|
| Description |
The Database of Genomic Variants (DGV) is a curated resource that provides publicly available data on structural variation (e.g., deletions, duplications, insertions) in the human genome, collected from peer-reviewed studies. It serves as a key reference for understanding genomic variation in healthy individuals and distinguishing benign variants from disease-associated changes. Downloaded on 12/16/2024 from https://dgv.tcag.ca/dgv/docs/GRCh38_hg38_variants_2020-02-25.txt DataPrep.py converts raw file to GRR format. |
| Labels |
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| deletion_duplication | str |
deletion_duplication |
duplication or deletion
|
 |
deletion, loss, insertion, duplication, alu insertion, gain, novel sequence insertion, line1 insertion, sequence alteration, sva insertion, gain+loss, complex, mobile element insertion, tandem duplication, inversion, alu deletion, line1 deletion, mobile element deletion, sva deletion, herv deletion, Other |
| cnv_name | str |
cnv_name |
Handy name to refer to the CNV.
|
No histogram: Too many unique values 101 for categorical histogram. |
NO DOMAIN |
Fragments
not computed
Files
| Filename | Size | md5 |
|---|---|---|
| DataPrep.py | 681.0 B | 5046dfa84795f7f2b22720161a04c745 |
| GRCh38_hg38_variants_2020-02-25.txt | 208.69 MB | 9a9267b3bd5889e97751ef1dec097ac0 |
| genomic_resource.yaml | 1.27 KB | 6d6ef3c0f9669a8add1df243a71ac926 |
| prepped_GRCh38_hg38_variants_2020-02-25.txt.gz | 43.95 MB | 1cfdf52681c3d2baaafd867ce10e3e88 |
| prepped_GRCh38_hg38_variants_2020-02-25.txt.gz.tbi | 164.04 KB | d8dc5087a6918b4108be48b42b2addc1 |
| statistics/ |