Resource
| Id | hg19/gene_models/ensGene_v20200110 |
|---|---|
| Type | gene_models |
| Version | 0 |
| Summary |
Ensembl Genes v20200110
|
| Description |
The Ensembl Genes gene model set provides transcript and gene annotations produced by the Ensembl project and made available through the UCSC Genome Browser as the ensGene track. Ensembl annotations include protein-coding and noncoding gene models with stable Ensembl gene and transcript identifiers, supporting cross-dataset comparisons and functional interpretation of genomic variants, positions, and regions. Yates et al, Ensembl 2026, Nucleic Acids Research 2026 Nassar et al, The UCSC Genome Browser database: 2025 update, Nucleic Acids Research 2025 Downloaded on: 05/21/2026 https://hgdownload.soe.ucsc.edu/goldenPath/hg19/bigZips/genes/hg19.ensGene.gtf.gz |
| Labels |
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Configuration
Gene models file: hg19.ensGene.txt.gz
Format: default
Statistics
Chromosome statistics
| Transcript number | Protein coding transcript number | Gene number | Protein coding gene number | |
|---|---|---|---|---|
| Global | 204,940 | 99,380 | 60,234 | 21,823 |
| chr1 | 17,531 | 8,031 | 5,363 | 2,079 |
| chr10 | 6,503 | 2,978 | 2,260 | 772 |
| chr11 | 12,204 | 6,371 | 3,208 | 1,327 |
| chr12 | 11,387 | 5,968 | 2,818 | 1,071 |
| chr13 | 3,022 | 1,107 | 1,217 | 329 |
| chr14 | 7,522 | 3,835 | 2,244 | 856 |
| chr15 | 7,314 | 3,357 | 2,080 | 631 |
| chr16 | 9,697 | 4,957 | 2,343 | 885 |
| chr17 | 12,580 | 6,616 | 2,903 | 1,209 |
| chr17_gl000204_random | 1 | 1 | 1 | 1 |
| chr17_gl000205_random | 11 | 1 | 11 | 1 |
| chr18 | 3,578 | 1,682 | 1,127 | 289 |
| chr19 | 12,758 | 7,372 | 2,910 | 1,485 |
| chr19_gl000209_random | 12 | 12 | 2 | 2 |
| chr1_gl000191_random | 4 | 4 | 2 | 2 |
| chr1_gl000192_random | 7 | 2 | 7 | 2 |
| chr2 | 13,979 | 6,322 | 4,047 | 1,333 |
| chr20 | 4,040 | 2,018 | 1,317 | 560 |
| chr21 | 2,178 | 934 | 736 | 243 |
| chr22 | 4,459 | 2,176 | 1,263 | 499 |
| chr3 | 11,759 | 5,715 | 3,101 | 1,081 |
| chr4 | 7,803 | 3,577 | 2,563 | 769 |
| chr4_gl000193_random | 7 | 2 | 7 | 2 |
| chr4_gl000194_random | 3 | 1 | 3 | 1 |
| chr5 | 9,107 | 4,039 | 2,859 | 894 |
| chr6 | 8,443 | 4,278 | 2,905 | 1,055 |
| chr6_apd_hap1 | 668 | 342 | 200 | 83 |
| chr6_cox_hap2 | 1,396 | 665 | 389 | 176 |
| chr6_dbb_hap3 | 1,334 | 612 | 361 | 160 |
| chr6_mann_hap4 | 1,163 | 581 | 345 | 145 |
| chr6_mcf_hap5 | 1,281 | 611 | 316 | 163 |
| chr6_qbl_hap6 | 1,362 | 649 | 369 | 167 |
| chr6_ssto_hap7 | 1,235 | 574 | 349 | 142 |
| chr7 | 9,457 | 4,337 | 2,876 | 983 |
| chr7_gl000195_random | 2 | 1 | 2 | 1 |
| chr8 | 7,751 | 3,571 | 2,386 | 702 |
| chr8_gl000196_random | 1 | 0 | 1 | 0 |
| chr9 | 6,513 | 2,945 | 2,323 | 809 |
| chr9_gl000199_random | 2 | 0 | 2 | 0 |
| chr9_gl000201_random | 2 | 2 | 2 | 2 |
| chrM | 37 | 13 | 37 | 13 |
| chrUn_gl000211 | 1 | 0 | 1 | 0 |
| chrUn_gl000212 | 4 | 1 | 4 | 1 |
| chrUn_gl000213 | 4 | 2 | 4 | 2 |
| chrUn_gl000215 | 1 | 1 | 1 | 1 |
| chrUn_gl000216 | 1 | 0 | 1 | 0 |
| chrUn_gl000218 | 1 | 1 | 1 | 1 |
| chrUn_gl000219 | 8 | 2 | 7 | 1 |
| chrUn_gl000220 | 14 | 0 | 12 | 0 |
| chrUn_gl000221 | 1 | 1 | 1 | 1 |
| chrUn_gl000222 | 5 | 2 | 5 | 2 |
| chrUn_gl000223 | 5 | 3 | 5 | 3 |
| chrUn_gl000224 | 7 | 0 | 7 | 0 |
| chrUn_gl000225 | 1 | 0 | 1 | 0 |
| chrUn_gl000228 | 17 | 1 | 17 | 1 |
| chrUn_gl000229 | 1 | 0 | 1 | 0 |
| chrUn_gl000230 | 5 | 0 | 5 | 0 |
| chrUn_gl000231 | 1 | 0 | 1 | 0 |
| chrUn_gl000233 | 3 | 0 | 3 | 0 |
| chrUn_gl000236 | 1 | 0 | 1 | 0 |
| chrUn_gl000237 | 1 | 1 | 1 | 1 |
| chrUn_gl000240 | 4 | 0 | 4 | 0 |
| chrUn_gl000241 | 1 | 0 | 1 | 0 |
| chrUn_gl000242 | 1 | 1 | 1 | 1 |
| chrUn_gl000243 | 3 | 0 | 3 | 0 |
| chrUn_gl000247 | 4 | 0 | 4 | 0 |
| chrX | 6,001 | 2,945 | 2,392 | 830 |
| chrY | 731 | 160 | 495 | 54 |
Files
| Filename | Size | md5 |
|---|---|---|
| build.sh | 77.0 B | 40bd4a63cea9c398da50ded22961ae4d |
| genomic_resource.yaml | 1.12 KB | 16e0058cabf6bb11c69ab9ea9c6f5414 |
| hg19.ensGene.gtf.gz | 26.48 MB | 2d283e590c63dc4c656a7c9a16f98f64 |
| hg19.ensGene.txt.gz | 9.34 MB | ff1cbc9333946005c24a8f893900ae00 |
| statistics/ |